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Quickstart
Getting started
Install napari
Launch napari
Open images in napari
Tour of the napari viewer
Layers: bringing data into napari
Feature highlights
Layers guide
Image
Labels
Shapes
Points
Tracks
Vectors
Surface
Tutorials
Annotating videos with napari
Using Dask and napari to process & view large datasets
Annotating segmentation with text and bounding boxes
Single cell tracking with napari
How-to guides
Extending napari
Creating widgets
Hooking up your own events
napari + ImageJ how-to guide
Napari in Docker
Performance monitoring
Running napari headlessly
Creating and testing themes
In-depth explanations
3D interactivity
Axis names in napari
Axis directions, data, and handedness
Triangulation backends for the napari Shapes layer
Rendering
napari performance
Preferences
Contexts and Expressions in napari
napari event loop
Multithreading in napari
Events reference
Glossary
Workshops
Sample databases
Troubleshooting
Examples
Tags
analysis (4)
Add labels with features
Annotate 2D
Annotate segmentation with text
Paint nD
colored 2D tracks (1)
Cell tracking example
experimental (10)
Action manager
Interaction box image
Interactive move rectangle
Linked layers
New theme
Scale bar
Spherical points
Surface normals wireframe
Surface timeseries
Viewer FPS label
features-table (6)
Add labels with features
Add points with features
Add shapes with features
Features table widget
Heart with multiple annotations
nD points with features
gui (16)
3D image plane rendering
Action manager
bbox annotator
Custom key bindings
Custom mouse functions
Features table widget
Fourier transform playground
Get current viewer
Custom image interpolation kernels
Method to get napari style in magicgui based windows
magicgui Image Arithmetic
magicgui parameter sweep
magicgui viewer
Mouse drag callback
Multiple viewer widget
Set theme
historical (3)
Shapes to labels
Update console
napari without gui_qt
interactivity (7)
Cursor position
Cursor ray
Drag and Drop Python Code Example
Fourier transform playground
Method to get napari style in magicgui based windows
Interactive scripting
Image warping with mouse event callbacks
layers (8)
3D image plane rendering
3D Paths
Add 3D image
Add labels
Add labels with features
Glasbey colormap
Visualizing optical flow in napari
Displaying xarray data in napari
visualization-advanced (24)
3D image plane rendering
3D Paths
Add multiscale image
Add vectors color by angle
Affine Transforms 3D
Affine transforms
Cell tracking example
Dynamic projections dask
Export Figure
Export regions of interest (ROIs) to png
Heart with multiple annotations
Layer Bounding Box (Border) Overlay
3D Layer Bounding Box Overlay
Layer Text Scaling
nD multiscale image
nD multiscale image non-uniform
Points over time
Comparison of Screenshot and Figure Export
Show points based on feature
To screenshot
Tracks 3D
Tracks 3D with graph
Visualizing optical flow in napari
Displaying xarray data in napari
visualization-basic (26)
Add grayscale image
Add image
Add image transformed
Add labels
Add points
Add points with features
Add points with multicolor text
Add points with text
Add shapes
Add shapes with features
Add shapes with text
Add surface 2D
Add vectors
Add vectors image
Colorbars and auto-tiling of overlays in grid mode
Glasbey colormap
Grid mode
Image depth
Launch napari and display an image
Labels 2D
Layers
Minimum blending
Pass colormaps
Point cloud
Set colormaps
Tracks 2D
visualization-nD (23)
3D vector field and image across time
Add 3D image
Add points 3D
Add points on nD shapes
Concentric spheres
Dask nD image
Custom image interpolation kernels
Image points 3D
Labels 3D
3D Layer Bounding Box Overlay
Mixed dimensions labels
nD image
nD labels
nD points
nD points with features
nD shapes
nD shapes with text
nD surface
nD vectors
nD vectors image
Surface with multiple textures
Surface with texture and vertex_colors
Swap dims
xarray (1)
Displaying xarray data in napari
Release Notes
napari 0.7.0
napari 0.6.6
napari 0.6.5
napari 0.6.4
napari 0.6.3
napari 0.6.2
napari 0.6.1
napari 0.6.0
napari 0.5.6
napari 0.5.5
napari 0.5.4
napari 0.5.3
napari 0.5.2
napari 0.5.1
napari 0.5.0
napari 0.4.19
napari 0.4.18
napari 0.4.17
napari 0.4.16
napari 0.4.15
napari 0.4.14
napari 0.4.13
napari 0.4.12
napari 0.4.11
napari 0.4.10
napari 0.4.9
napari 0.4.8
napari 0.4.7
napari 0.4.6
napari 0.4.5
napari 0.4.4
napari 0.4.3
napari 0.4.2
napari 0.4.1
napari 0.4.0
napari 0.3.8
napari 0.3.7
napari 0.3.6
napari 0.3.5
napari 0.3.4
napari 0.3.3
napari 0.3.2
napari 0.3.1
napari 0.3.0
napari 0.2.12
napari 0.2.11
napari 0.2.10
napari 0.2.9
napari 0.2.8
napari 0.2.7
napari 0.2.6
napari 0.2.5
napari 0.2.4
napari 0.2.3
napari 0.2.1
napari 0.2.0
napari 0.1.5
napari 0.1.3
napari 0.1.0
Resources
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